Problem: When Gephi is run from NetBeans it does not appear to use NetBeans settings for heap memory xmx xms etc.
Solution: You need to overwrite these settings in the directory where you have gephi source-code:
../gephi/nbproject/project.properties
e.g.: run.args.extra=-J-Xms256m -J-Xmx10g -J-Dsun.java2d.noddraw=true -J-Dsun.awt.noerasebackground=true
You can double check that your arguments are read by looking at the Netbeans output window in which you should see something like:
Diagnostic information
Input arguments:
-Djdk.home=/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home
-Dnetbeans.system_http_proxy=DIRECT
-Dnetbeans.system_http_non_proxy_hosts=
-Dnetbeans.dirs=/Users/neil/Documents/neil/Research/Gephi/gephi
0.8b/build/cluster:/Applications/NetBeans/NetBeans
7.0.1.app/Contents/Resources/NetBeans/platform
-Dnetbeans.home=/Applications/NetBeans/NetBeans
7.0.1.app/Contents/Resources/NetBeans/platform
-Dnetbeans.logger.console=true
-ea
-Xms256m
-Xmx6g
-Dsun.java2d.noddraw=true
-Dsun.awt.noerasebackground=true
-XX:+HeapDumpOnOutOfMemoryError
-XX:HeapDumpPath=/Users/neil/Documents/neil/Research/Gephi/gephi
0.8b/SemanticExpansionFilter/../build/testuserdir/var/log/heapdump.hprof
Search Keywords:
module modular project A java.lang.OutOfMemoryError exception has occurred. Click Show Details or see the messages.log file located in your /Users/neil/Documents/neil/Research/GraphSearch/code/gephibzr/gephi/build/testuserdir/var/log folder.
Memory error. You need to increase the maximum memory settings (-Xmx) in the Gephi startup settings file.
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